Chip-atlas数据库

Author: swqb

August undefined, 2024

WebChIP-Atlas是一个用于可视化和利用ChIP-seq公共数据的综合和全面的数据库。. 研究人员充分整合了6个代表性模式生物 (人、小鼠、大鼠、果蝇、线虫和芽殖酵母)的公共 ChIP … WebThe functional genomics data collection (ArrayExpress), stores data from high-throughput functional genomics experiments, and provides data for reuse to the research community. In line with community guidelines, a study typically contains metadata such as detailed sample annotations, protocols, processed data and raw data. Raw sequence reads ...

ChIPBase v2.0: Decoding Transcriptional Regulactory Networks of Non

WebGene Expression Omnibus. GEO is a public functional genomics data repository supporting MIAME-compliant data submissions. Array- and sequence-based data are accepted. … WebApr 10, 2024 · atlas 是apache下的大数据的元数据管理和数据治理平台，是Hadoop社区为解决Hadoop生态系统的元数据治理问题而产生的开源项目，它为Hadoop集群提供了包括数据分类、集中策略引擎、数据血缘、安全和生命周期管理在内的元数据治理核心能力。 oid and bonds

ChIP-Atlas

http://gtrd20-06.biouml.org/ http://www.ciidbnu.org/chip/ WebAug 21, 2024 · ChIP‐Atlas数据库网页工具-（2024年6月份）第21周（总第69周）. 本次分享的文献发表了一个网页数据库，把其它数据库（GEO, ArrayExpress, DDBJ, ENCODE等等）的表观数据（主要是ChIP-seq and DNase-seq）整合，主要是6个模式生物的数据，包括 (human, mouse, rat, fruit fly, nematode, and ... oidd wharton courses

中国收入分配研究院 China Institute For Income Distribution-CHIP …

http://gtrd20-06.biouml.org/ WebJun 21, 2024 · 欢迎关注”生信修炼手册”! ChIP-Atlas收集整理了SRA数据库中的大量chip_seq数据，并基于这些原始数据进行了后续分析，将分析结果整理成在线服务并发 … oid and sidWeb对于TCGA (The Cancer Genome Atlas)这个在生信研究中大佬级别的存在，想必大家伙儿都已经耳熟能详了吧？. 前不久我们一本八道老师对TCGA家族的好兄弟TCIA (The Cancer Immunome Atlas)做了详细介绍，大快朵颐之后，不少小伙伴不禁感慨意犹未尽。. 那么在今天，就来说说TCGA ... oid coding

"WebChIP-Atlas is able to show alignment and peak-call results for all public ChIP-seq and DNase-seq data archived in the NCBI Sequence Read Archive (SRA), which … " - Chip-atlas数据库

Chip-atlas数据库

中国收入分配研究院 China Institute For Income Distribution-CHIP …

Webchip项目组按照东、中、西分层，根据系统抽样方法抽取得到chip样本。样本覆盖了从15个省份126城市234个县区抽选出的18948个住户样本和64777个个体样本，其中包括7175户城镇住户样本、11013户农村住户样本和760户外来务工住户样本。 WebThe most complete collection of uniformly processed ChIP-seq data on identification of transcription factor binding sites for human and mouse. Convenient web interface with advanced search, browsing and genome browser based on the BioUML platform. For support or any questions contact [email protected]. Start » Documentation » Download ...

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WebAging Atlas aims to compile large gene expression and regulation datasets created by a range of high-throughput omics technologies and serve as a valuable resource for a range of life science researchers. The current implementation includes five modules: transcriptomics, epigenomics, single-cell transcriptomics, proteomics, and pharmacogenomics. WebKidney Renal Clear Cell Carcinoma (TCGA, PanCancer Atlas) 512 samples. Renal Clear Cell Carcinoma (UTokyo, Nat Genet 2013) 106 samples. Renal Non-Clear Cell Carcinoma Select All; Kidney Chromophobe (TCGA, Cancer Cell 2014) 66 samples. Kidney Chromophobe (TCGA, Firehose Legacy) 113 samples.

http://chip-atlas.org/ WebThe Pathology Atlas contains mRNA and protein expression data for the most common forms of human cancer. Correlation analyses based on mRNA expression levels of human genes in cancer tissue and the clinical outcome for almost 8000 corresponding cancer patients is presented in a gene-centric manner, and includes more than 18000 Kaplan …

WebJun 21, 2024 · 欢迎关注”生信修炼手册”! ChIP-Atlas收集整理了SRA数据库中的大量chip_seq数据，并基于这些原始数据进行了后续分析，将分析结果整理成在线服务并发布，方便检索与查询，网址如下 WebNov 23, 2024 · ChIP-Atlas收集整理了SRA数据库中的大量chip_seq数据，并基于这些原始数据进行了后续分析，将分析结果整理成在线服务并发布，方便检索与查询/ 构建的流程如下. 下载SRA原始数据，采用sratoolkit转换成fastq, 然后用bowtie2比对参考基因组，用macs2进行peak calling。官网 ...

WebENCODE. Functional genomics. Functional characterization. Encyclopedia of elements. Rush Alzheimer’s. EN-TEx. Deeply profiled cell lines. Protein knockdown (Degron) Computational and integrative products.

WebJun 30, 2024 · 2.点击Tissue，进入组织图谱(Tissue Atlas) 进入该板块后，首先便是TP53基因的基本信息介绍，包括名称，蛋白分类，蛋白的定位等信息。随后，数据库展示 … oict oakland terminalWebchip 调查与 nbs 住户调查十分类似。 li 等学者（ 2008 ）曾探讨过 nbs 住户调查样本是如何选择的。其他有关 nbs 调查的细节可详见最新的 nbs 统计报告和相关出版物。所有的 … my information on accountWeb如果有更多人需要chip数据，请直接在chip项目有关平台申请。（3）本数据使用制度的最终解释权归属于“北京师范大学中国收入分配研究院”。（4）如果您使用CHIP数据有一些研究成果，希望您能告诉我们，以便于我们整理CHIP数据的使用情况。 my information on this pchttp://www.ciidbnu.org/chip/chips.asp?year=2013 oidc.mail.aol.com took too long to respondWeb选择完之后，igv内就会倒入这个TF的chip-seq的数据，如下图。你可以在igv中找到自己的gene of interest，然后看看这个峰的位置在哪。以上就是教你如何利用现有的public Chip-seq数据来搜索调控你gene的TF。 oide infoWebFANTOM5 miRNA atlas. The FANTOM5 integrated miRNA expression atlas shows the expression patterns of miRNAs profiled by sequencing short RNA libraries obtained from human, mouse, rat dog and chicken samples. Both the sRNA expression profile of the mature miRNA and the CAGE expression profile of its associated promoter can be … oidd whartonWebOct 4, 2024 · ChIP-Atlas. An integrative, comprehensive database to explore public Epigenetic dataset, including ChIP-Seq, DNase-Seq, ATAC-Seq, and Bisulfite-Seq data: ChIP-Atlas covers almost all public data … oid in research